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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918218.1_cds_XP_016467712.1_60429
CDS Infomation

[gene=LOC107790309] [db_xref=GeneID:107790309] [protein=regulatory-associated protein of TOR 1-like] [protein_id=XP_016467712.1] [location=complement(join(1557..1895,2143..2224,2437..2522,5170..5271,8020..8130,8241..8324,9408..9509,9626..9704,9785..9929,10020..10168,10773..10933,11060..11176,11254..11412,11532..11614,11919..11981,14130..14190,14384..14535,15264..15333))] [gbkey=CDS]
Sequence

ATGAAAGGGATCAAAAAGCTTACCAGTGAGCCCCACATGCCTCCAGGTGTGACATTTGCT
AGGAATACGACTGCTGCCAACATTTTAACTAAGCCTTCCATGACAAAAGTGAAAAGAAAA
GGAGAGACGGGATCTCCTTGTCTTAAGCCTTTGTGTGATGCAAAGAAACCTTTTGGGAGA
TTCATTTATGATAATGGGCAACTTTACAGTGGAGATGCAAAAGAGCCGTTTGGGGAAGGG
GAAACCAGCTTGCTCATAACTGTTTTAAGTCTGTTAGCAAGAAGTTCTTCAGGGCTCTCA
GTCCGTCACATAGCATTTGCTGAAGGCTCTGTGCCATACTTGTGGAATCCATTTTCTGTG
GCACCTCAAAAAGCCCTTGACACAATTGGGAGAACATTGAATGAACAATATGAGAGGTGG
CAACCTAGGGCACACTACAAGATCTCCTTGGATCCTACTGTTGTTGATGTTAAGAAACTT
TGCACAACATGTAGACAGTATGCCAAGTCAGAACGAGTTCTGTTCCATTATAATGGACAT
GGTGTGCCAAAACCAACATCCAATGGTGAAATTTGGCTATTTAATAAGAGTTATACGCAG
TATATCCCATTGCCGATTACTGACCTGGACTCTTGGTTGAAGACACCATCGATCTATGTC
TTTGACTGCTCAGCTGCTGGGATGATTGTTAATACCTTTATAGAGCTCCAAGACTTGACT
GTCTCTGATTCCTCTGGACCTTCTACGAGAGATTGTATTCTGCTTGCTGCTTGTGAAGCA
CATGAGACACTTCCTCAAAGTGCTGAATTTCCTGCTGATGTTTTCACTTCCTGCCTCACA
ACTCCAATCAAAATGGCATTGAGATGGTTTTGCACACGGTCATTGATTCGTGAGTCACTT
GATTATGGTCTAATAGATCGAATTCCTGGACGCCAAACTGATCGAAAGACACCTCTTGGT
GAATTGAATTGGATTCTCACTGCAGTAACTGACACAATTGCCTGGAATCCACGAGATCTA
TTTCAAAAATTGTTCAGGCAAGACCTATTAGTTGCTAGTTTATTCAGAAATTTTTTACTT
GCTGAAAGAATCGTGCGTTCTGCAAATTGTTCACCAATTTCATACCCAATGCTACCACCT
ACTCATCAGCACCACATGTGGGATTCTTGGGACATGGCAGCAGAAATCTGCCTTTTGCAG
CTTCCTACTTTGATTGATGATCCGAATGTGGAATTTCAGCCTAGCCCATTCTTCACGGAA
GAGTTGACAGCTTTTGAGGTTTGGCTTGATCATGGATCAGAGAATAAAAATCCACCAGAG
CAGTTGCCCATTGTTCTACAGGTGTTACATACTCAATGCCACCGGTTCCGTGCACTGGTT
CTTCTTGGGAGATTTCTCGATATGGGACTTTGGGCTGTAGATCTGGTCTTGTCTGTTGGA
ATATTTCCTTACGTTCTAAAGCTTTTGCAAACCACGACTCCAGAGCTTAGGCAAATTCTT
GTCTTCATTTGGACGAAGATCCTTGCTGTTGATAAGCTTGCATCTGGTGAGATTTCTTCT
ATCATGGCTTGGGATCTTGACAAAGAGCAGCTTGTAAATACTACTCCAACATCCTCGGAT
TACAGCATCTCAGCATTGTCTGCTTCTCAAGTTCATGCGGGTCAATTTGTTGCTGGCTTC
GTGGATGGATCGGTCAAACTATTCGATATTCAAATGCCAGAAATGCTTGTTTGTGCAACA
CGACCTCACCCCGAAGTGGAAAGAGTTGTTGGGGTTGGCTTTCAACCTGAACTTCAACCA
GCGAAGGTTGTCAGTGCATCTCAGGCTGGTGATATTCAGTTCCTTGATATGAGAAATCTC
AAGGAGGCATACTTGACCATTTATGCTCACAGGGGATCACTTACATCTCTGGCGGTCCAT
CGTCATGCACCCCTTGTAGCTAGCGGTTCATCTAAGCAACTTATCAAAGTGTTCAACCTG
GAGGGTGAGCAGTTAGGCACTATTAGGTATTTGTCCACCTTTATGGCTCAGAAGATAGGA
TCTGTAAGATGTCTTACCTTCCACCCCTATCAAATGCTGCTTGCTGCTGGTGCAGCAGAT
GCTTGTGTTTCTATCTATGCTGATGAGGTCCCCCCACCAAGATAA

Peptide Sequence

PEP ID

XP_016467712.1
PEP Infomation

PREDICTED: regulatory-associated protein of TOR 1-like [Nicotiana tabacum]
Sequence

MKGIKKLTSEPHMPPGVTFARNTTAANILTKPSMTKVKRKGETGSPCLKPLCDAKKPFGR
FIYDNGQLYSGDAKEPFGEGETSLLITVLSLLARSSSGLSVRHIAFAEGSVPYLWNPFSV
APQKALDTIGRTLNEQYERWQPRAHYKISLDPTVVDVKKLCTTCRQYAKSERVLFHYNGH
GVPKPTSNGEIWLFNKSYTQYIPLPITDLDSWLKTPSIYVFDCSAAGMIVNTFIELQDLT
VSDSSGPSTRDCILLAACEAHETLPQSAEFPADVFTSCLTTPIKMALRWFCTRSLIRESL
DYGLIDRIPGRQTDRKTPLGELNWILTAVTDTIAWNPRDLFQKLFRQDLLVASLFRNFLL
AERIVRSANCSPISYPMLPPTHQHHMWDSWDMAAEICLLQLPTLIDDPNVEFQPSPFFTE
ELTAFEVWLDHGSENKNPPEQLPIVLQVLHTQCHRFRALVLLGRFLDMGLWAVDLVLSVG
IFPYVLKLLQTTTPELRQILVFIWTKILAVDKLASGEISSIMAWDLDKEQLVNTTPTSSD
YSISALSASQVHAGQFVAGFVDGSVKLFDIQMPEMLVCATRPHPEVERVVGVGFQPELQP
AKVVSASQAGDIQFLDMRNLKEAYLTIYAHRGSLTSLAVHRHAPLVASGSSKQLIKVFNL
EGEQLGTIRYLSTFMAQKIGSVRCLTFHPYQMLLAAGAADACVSIYADEVPPPR

Transcript Sequence

Gene sequence data has not been registered.